GBrowse: Internal Server Error

[Annie Benitha Thomas]

Hello,

I had set the GBrowse on my local machine just fine until I followed the GBrowse NGS tutorial, and I followed all the steps til GBrowse2. 

And I tried opening http://localhost/cgi-bin/gb2/gbrowse/volvox/, and I get Internal Server Error.

The error logs show,

Wed Jun 28 14:37:21

AH00094: Command line: '/usr/sbin/apache2'

Bio::Graphics version 2.24 required--this is only version 1.982 at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2/AuthorizedFeatureFile.pm line 5, <DATA> line 192.

BEGIN failed--compilation aborted at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2/AuthorizedFeatureFile.pm line 5, <DATA> line 192.

Compilation failed in require at /usr/share/perl/5.22/base.pm line 97, <DATA> line 192.

        ...propagated at /usr/share/perl/5.22/base.pm line 106, <DATA> line 192.

BEGIN failed--compilation aborted at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2.pm line 9, <DATA> line 192.

End of script output before headers: gbrowse

Thanks,

Annie

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[Annie Benitha Thomas]

Hello,

Is there an update on this?

Thanks,

Annie

On Wed, Jun 28, 2017 at 2:47 PM, Annie Benitha Thomas <[hidden email]> wrote:

Hello,

I had set the GBrowse on my local machine just fine until I followed the GBrowse NGS tutorial, and I followed all the steps til GBrowse2. 

And I tried opening http://localhost/cgi-bin/gb2/gbrowse/volvox/, and I get Internal Server Error.

The error logs show,

Wed Jun 28 14:37:21

AH00094: Command line: '/usr/sbin/apache2'

Bio::Graphics version 2.24 required--this is only version 1.982 at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2/AuthorizedFeatureFile.pm line 5, <DATA> line 192.

BEGIN failed--compilation aborted at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2/AuthorizedFeatureFile.pm line 5, <DATA> line 192.

Compilation failed in require at /usr/share/perl/5.22/base.pm line 97, <DATA> line 192.

        ...propagated at /usr/share/perl/5.22/base.pm line 106, <DATA> line 192.

BEGIN failed--compilation aborted at /usr/local/lib/x86_64-linux-gnu/perl/5.22.1/Bio/Graphics/Browser2.pm line 9, <DATA> line 192.

End of script output before headers: gbrowse

Thanks,

Annie

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